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CAZyme Gene Cluster: MGYG000003252_424|CGC4
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000003252_04451 | Sensor histidine kinase RcsC |
TC | 102409 | 104841 | - | 2.A.21.9.2 |
| MGYG000003252_04452 | hypothetical protein |
CAZyme | 105063 | 107762 | + | GH138 |
| MGYG000003252_04453 | Beta-galactosidase |
CAZyme | 107772 | 111971 | + | GH137| GH2| CBM57 |
| MGYG000003252_04454 | HTH-type transcriptional activator RhaS |
TF | 112104 | 112949 | + | HTH_AraC |
| MGYG000003252_04455 | Sensor histidine kinase RcsC |
STP | 112946 | 114448 | - | HisKA| HATPase_c |
| MGYG000003252_04456 | Beta-galactosidase |
CAZyme | 114699 | 117980 | + | GH2| CBM67 |
| MGYG000003252_04457 | Beta-galactosidase |
CAZyme | 118016 | 120868 | + | GH2 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000003252_04452 | GH138_e0|3.2.1.- | |
| MGYG000003252_04453 | GH2_e49|GH137_e0|CBM57_e1|3.2.1.31|3.2.1.185 | pectin|beta-glucuronan |
| MGYG000003252_04456 | GH2_e4|CBM67_e8|3.2.1.23 | beta-galactan |
| MGYG000003252_04457 | GH2_e77|3.2.1.- | pectin |
Substrate predicted by dbCAN-PUL is pectin download this fig
